Sequence Similarity Clusters for the Entities in PDB 1G3N

Entity #1 | Chains: A,E
CYCLIN-DEPENDENT KINASE 6 protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 16 2905
95 % 9 16 3614 Flexibility: Low
Max RMSD: 8.1, Avg RMSD: 2.6
PDBFlex
90 % 9 16 3675
70 % 13 25 2202
50 % 13 25 2192
40 % 434 465 50
30 % 3758 4073 2
Entity #2 | Chains: B,F
CYCLIN-DEPENDENT KINASE 6 INHIBITOR protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16220
95 % 5 6 6662 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 5 6 6654
70 % 5 6 6481
50 % 5 6 6056
40 % 111 129 188
30 % 202 231 68
Entity #3 | Chains: C,G
V-CYCLIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39556
95 % 1 1 30585 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 29495
70 % 1 1 26564
50 % 1 1 22706
40 % 1 1 19995
30 % 1 7 6578

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures