Sequence Similarity Clusters for the Entities in PDB 1G3N

Entity #1 | Chains: A,E
CYCLIN-DEPENDENT KINASE 6 protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 16 3406
95 % 9 16 3723 Flexibility: Low
Max RMSD: 8.1, Avg RMSD: 2.7
PDBFlex
90 % 9 16 3793
70 % 13 25 2275
50 % 408 433 66
40 % 434 465 54
30 % 3989 4337 2
Entity #2 | Chains: B,F
CYCLIN-DEPENDENT KINASE 6 INHIBITOR protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16724
95 % 5 6 6709 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 5 6 6699
70 % 5 6 6495
50 % 5 6 6050
40 % 128 150 171
30 % 279 327 42
Entity #3 | Chains: C,G
V-CYCLIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45586
95 % 1 1 37994 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 36234
70 % 1 1 32141
50 % 1 1 27332
40 % 1 1 23964
30 % 1 7 6066

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures