Sequence Similarity Clusters for the Entities in PDB 1G3I

Entity #1 | Chains: A,B,C,D,E,F,S,T,U,V,W,X
ATP-DEPENDENT HSLU PROTEASE ATP-BINDING SUBUNIT HSLU protein, length: 444 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 2109
95 % 4 4 2415 Flexibility: Low
Max RMSD: 5.7, Avg RMSD: 1.7
PDBFlex
90 % 4 4 2485
70 % 11 16 616
50 % 13 18 616
40 % 13 18 656
30 % 15 27 459
Entity #2 | Chains: G,H,I,J,K,L,M,N,O,P,Q,R
ATP-DEPENDENT PROTEASE HSLV protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 1094
95 % 6 6 1305 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 6 6 1329
70 % 14 16 527
50 % 20 23 384
40 % 20 23 413
30 % 20 23 410

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures