Sequence Similarity Clusters for the Entities in PDB 1G30

Entity #1 | Chains: A
PROTHROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 210 338 45
95 % 210 339 64 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 210 339 67
70 % 210 341 78
50 % 210 341 109
40 % 210 341 132
30 % 210 341 140
Entity #2 | Chains: B
PROTHROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 186 290 75
95 % 230 377 52 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 232 384 48
70 % 232 408 46
50 % 232 408 84
40 % 1247 1864 4
30 % 1255 1886 6
Entity #3 | Chains: C
HIRUDIN IIB protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures