Sequence Similarity Clusters for the Entities in PDB 1G30

Entity #1 | Chains: A
PROTHROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 208 335 45
95 % 208 336 61 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 208 336 66
70 % 208 338 77
50 % 208 338 102
40 % 208 338 126
30 % 208 338 137
Entity #2 | Chains: B
PROTHROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 187 290 55
95 % 228 374 35 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 230 381 39
70 % 230 405 45
50 % 230 405 81
40 % 1143 1695 4
30 % 1231 1845 6
Entity #3 | Chains: C
HIRUDIN IIB protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.