Sequence Similarity Clusters for the Entities in PDB 1G30

Entity #1 | Chains: A
PROTHROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 206 333 44
95 % 206 334 60 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 206 334 64
70 % 206 336 77
50 % 206 336 100
40 % 206 336 124
30 % 206 336 136
Entity #2 | Chains: B
PROTHROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 185 288 55
95 % 226 372 36 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 228 379 38
70 % 228 403 45
50 % 228 403 78
40 % 1133 1679 4
30 % 1221 1827 6
Entity #3 | Chains: C
HIRUDIN IIB protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.