Sequence Similarity Clusters for the Entities in PDB 1G2M

Entity #1 | Chains: A
COAGULATION FACTOR X protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 134 135 210
95 % 134 135 268 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 134 135 279
70 % 135 136 323
50 % 692 709 14
40 % 1816 1884 4
30 % 1827 1898 7
Entity #2 | Chains: B
COAGULATION FACTOR X protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 26 1503
95 % 26 26 1774 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.1
PDBFlex
90 % 26 26 1818
70 % 26 26 1832
50 % 26 26 1866
40 % 30 31 1532
30 % 30 31 1520

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures