Sequence Similarity Clusters for the Entities in PDB 1G2E

Entity #1 | Chains: B
5'-R(P*UP*AP*UP*UP*UP*AP*UP*UP*UP*A)-3' rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 43173
95 % 2 2 32660 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 3 22815
70 % 3 5 11769
50 % 3 5 10498
40 % 3 8 4602
30 % 5 13 3143

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.