Sequence Similarity Clusters for the Entities in PDB 1G2C

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q,S,U,W
FUSION PROTEIN (F) protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 5137
95 % 2 2 5458 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 2 5490
70 % 2 2 5375
50 % 2 2 5113
40 % 2 2 4796
30 % 2 2 4301
Entity #2 | Chains: B,D,F,H,J,L,N,P,R,T,V,X
FUSION PROTEIN (F) protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5353
95 % 1 1 5661 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 1 5686
70 % 1 1 5559
50 % 1 1 5274
40 % 1 1 4938
30 % 1 1 4414

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures