Sequence Similarity Clusters for the Entities in PDB 1G2C

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q,S,U,W
FUSION PROTEIN (F) protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4631
95 % 2 2 5444 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 2 5474
70 % 2 2 5379
50 % 2 2 5125
40 % 2 2 4838
30 % 2 2 4425
Entity #2 | Chains: B,D,F,H,J,L,N,P,R,T,V,X
FUSION PROTEIN (F) protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5766
95 % 1 1 6392 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 1 6394
70 % 1 1 6225
50 % 1 1 5816
40 % 1 1 5460
30 % 1 1 4901

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures