Sequence Similarity Clusters for the Entities in PDB 1G2C

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q,S,U,W
FUSION PROTEIN (F) protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4314
95 % 2 2 5109 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 2 5123
70 % 2 2 5067
50 % 2 2 4846
40 % 2 2 4584
30 % 2 2 4196
Entity #2 | Chains: B,D,F,H,J,L,N,P,R,T,V,X
FUSION PROTEIN (F) protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5422
95 % 1 1 6052 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 1 6044
70 % 1 1 5894
50 % 1 1 5512
40 % 1 1 5177
30 % 1 1 4651

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.