Sequence Similarity Clusters for the Entities in PDB 1G2C

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q,S,U,W
FUSION PROTEIN (F) protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4385
95 % 2 2 5188 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 2 5208
70 % 2 2 5140
50 % 2 2 4911
40 % 2 2 4644
30 % 2 2 4250
Entity #2 | Chains: B,D,F,H,J,L,N,P,R,T,V,X
FUSION PROTEIN (F) protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5487
95 % 1 1 6121 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 1 6115
70 % 1 1 5970
50 % 1 1 5586
40 % 1 1 5245
30 % 1 1 4709

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.