Sequence Similarity Clusters for the Entities in PDB 1G2C

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q,S,U,W
FUSION PROTEIN (F) protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4465
95 % 2 2 5266 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 2 5289
70 % 2 2 5209
50 % 2 2 4978
40 % 2 2 4711
30 % 2 2 4309
Entity #2 | Chains: B,D,F,H,J,L,N,P,R,T,V,X
FUSION PROTEIN (F) protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5575
95 % 1 1 6209 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 1 6205
70 % 1 1 6044
50 % 1 1 5654
40 % 1 1 5314
30 % 1 1 4770

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures