Sequence Similarity Clusters for the Entities in PDB 1G1Y

Entity #1 | Chains: A,B
ALPHA-AMYLASE II protein, length: 585 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32428
95 % 10 16 1781 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 10 16 1826
70 % 10 16 1835
50 % 10 16 1870
40 % 15 23 1278
30 % 26 34 1002

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures