Sequence Similarity Clusters for the Entities in PDB 1G1X

Entity #1 | Chains: D,I
16S RIBOSOMAL RNA rna, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E,J
16S RIBOSOMAL RNA rna, length: 44 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,F
30S RIBOSOMAL PROTEIN S6 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 71 244 13
95 % 77 250 20
90 % 77 250 25
70 % 77 250 35
50 % 77 250 70
40 % 77 250 94
30 % 88 289 80
Entity #4 | Chains: B,G
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25082
95 % 73 247 21
90 % 73 247 26
70 % 73 247 37
50 % 88 337 27
40 % 88 338 38
30 % 88 338 54
Entity #5 | Chains: C,H
30S RIBOSOMAL PROTEIN S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 49 566
95 % 64 205 63
90 % 64 205 66
70 % 64 205 75
50 % 64 205 109
40 % 64 205 129
30 % 64 205 145

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.