Sequence Similarity Clusters for the Entities in PDB 1G1X

Entity #1 | Chains: D,I
16S RIBOSOMAL RNA rna, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E,J
16S RIBOSOMAL RNA rna, length: 44 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,F
30S RIBOSOMAL PROTEIN S6 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 82 260 24
95 % 88 266 33
90 % 88 266 36
70 % 88 266 45
50 % 88 266 83
40 % 88 266 102
30 % 106 312 77
Entity #4 | Chains: B,G
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26213
95 % 84 263 34
90 % 84 263 39
70 % 84 263 49
50 % 106 366 26
40 % 106 367 36
30 % 106 367 55
Entity #5 | Chains: C,H
30S RIBOSOMAL PROTEIN S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 51 608
95 % 75 220 63
90 % 75 220 68
70 % 75 220 78
50 % 75 220 108
40 % 75 220 131
30 % 75 220 142

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.