Sequence Similarity Clusters for the Entities in PDB 1G13

Entity #1 | Chains: A,B,C
GANGLIOSIDE M2 ACTIVATOR PROTEIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25627
95 % 5 8 3977 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.3
PDBFlex
90 % 5 8 4046
70 % 5 9 3654
50 % 5 9 3560
40 % 5 9 3417
30 % 5 9 3135

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures