Sequence Similarity Clusters for the Entities in PDB 1G13

Entity #1 | Chains: A,B,C
GANGLIOSIDE M2 ACTIVATOR PROTEIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26118
95 % 5 8 4077 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.3
PDBFlex
90 % 5 8 4140
70 % 5 9 3736
50 % 5 9 3620
40 % 5 9 3465
30 % 5 9 3177

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures