Sequence Similarity Clusters for the Entities in PDB 1G0Y

Entity #1 | Chains: R
INTERLEUKIN-1 RECEPTOR, TYPE I protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 12436
95 % 4 5 11931 Flexibility: Medium
Max RMSD: 19.5, Avg RMSD: 7.4
PDBFlex
90 % 4 5 11766
70 % 4 5 11117
50 % 4 5 10375
40 % 4 5 9374
30 % 4 5 8044
Entity #2 | Chains: I
ANTAGONIST PEPTIDE AF10847 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49481
95 % 1 1 40960
90 % 1 1 39022
70 % 1 1 34493
50 % 1 1 29294
40 % 1 1 25674
30 % 1 1 21390

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures