Sequence Similarity Clusters for the Entities in PDB 1G0U

Entity #1 | Chains: A,O
PROTEASOME COMPONENT Y7 protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 170 243 13
95 % 170 243 21
90 % 170 243 22
70 % 170 243 32
50 % 181 270 40
40 % 724 1097 3
30 % 1264 1908 3
Entity #10 | Chains: J,X
PROTEASOME COMPONENT C11 protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 170 242 16
95 % 170 242 26
90 % 170 242 27
70 % 170 242 37
50 % 170 242 68
40 % 181 269 53
30 % 181 269 70
Entity #11 | Chains: K,Y
PROTEASOME COMPONENT PRE2 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 87 132 78
95 % 136 197 54
90 % 136 197 58
70 % 178 249 25
50 % 178 250 52
40 % 178 250 62
30 % 370 542 12
Entity #12 | Chains: L,Z
PROTEASOME COMPONENT C5 protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 140 211 23
95 % 170 243 22
90 % 170 243 23
70 % 170 243 33
50 % 170 243 67
40 % 181 269 52
30 % 181 270 68
Entity #13 | Chains: 1,M
PROTEASOME COMPONENT PRE4 protein, length: 266 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 170 243 8
95 % 170 243 15
90 % 170 243 17
70 % 170 243 27
50 % 170 243 66
40 % 181 261 55
30 % 181 261 74
Entity #14 | Chains: 2,N
PROTEASOME COMPONENT PRE3 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 170 243 14
95 % 170 243 24
90 % 170 243 25
70 % 170 243 35
50 % 181 261 48
40 % 181 261 56
30 % 371 542 12
Entity #2 | Chains: B,P
PROTEASOME COMPONENT Y13 protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 170 243 10
95 % 170 243 18
90 % 170 243 19
70 % 170 243 29
50 % 181 270 39
40 % 725 1097 3
30 % 1265 1908 3
Entity #3 | Chains: C,Q
PROTEASOME COMPONENT PRE6 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 170 243 11
95 % 170 243 19
90 % 170 243 20
70 % 170 243 30
50 % 181 269 44
40 % 726 1097 3
30 % 1266 1908 3
Entity #4 | Chains: D,R
PROTEASOME COMPONENT PUP2 protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36134
95 % 1 1 27843
90 % 170 244 16
70 % 170 244 26
50 % 181 271 37
40 % 727 1097 3
30 % 1267 1908 3
Entity #5 | Chains: E,S
PROTEASOME COMPONENT PRE5 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 19088
95 % 170 243 23
90 % 170 243 24
70 % 170 243 34
50 % 181 269 43
40 % 181 269 51
30 % 1268 1908 3
Entity #6 | Chains: F,T
PROTEASOME COMPONENT C1 protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 36 386
95 % 13 36 544
90 % 13 36 579
70 % 13 36 612
50 % 24 63 302
40 % 24 63 328
30 % 1269 1908 3
Entity #7 | Chains: G,U
PROTEASOME COMPONENT C7-ALPHA protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 170 243 12
95 % 170 243 20
90 % 170 243 21
70 % 170 243 31
50 % 181 269 45
40 % 181 270 49
30 % 1270 1908 3
Entity #8 | Chains: H,V
PROTEASOME COMPONENT PUP1 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 154 214 22
95 % 170 243 17
90 % 170 243 18
70 % 170 243 28
50 % 181 270 38
40 % 181 270 48
30 % 181 270 67
Entity #9 | Chains: I,W
PROTEASOME COMPONENT PUP3 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 170 243 15
95 % 170 243 25
90 % 170 243 26
70 % 170 243 36
50 % 181 269 46
40 % 181 270 50
30 % 181 270 69

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.