Sequence Similarity Clusters for the Entities in PDB 1G0B

Entity #1 | Chains: A
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 17 2806
95 % 5 18 3002 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 5 18 3061
70 % 90 337 18
50 % 220 765 4
40 % 221 770 7
30 % 601 1323 6
Entity #2 | Chains: B
HEMOGLOBIN BETA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 17 2805
95 % 5 18 2984 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 5 18 3040
70 % 101 352 15
50 % 221 765 4
40 % 222 770 7
30 % 602 1323 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2D5X 2 B Hemoglobin beta subunit 9796
2 1IWH 2 B Hemoglobin beta chain 9796
3 1NS9 2 B Hemoglobin beta subunit pH 7.1 Aquomet structure beta subunit 9796
4 1IBE 2 B HEMOGLOBIN (DEOXY) 9796
5 1G0B 2 B HEMOGLOBIN BETA CHAIN 9796
6 2ZLT 2 B Hemoglobin subunit beta 9796
7 1NS6 2 B Hemoglobin beta subunit pH 5.4 Hemichrome Structure beta subunit 9796
8 2ZLU 2 B Hemoglobin subunit beta 9796
9 2ZLV 2 B Hemoglobin subunit beta 9796
10 2MHB 2 B HEMOGLOBIN (AQUO MET) (BETA CHAIN) 9796
11 1Y8K 2 B, D Hemoglobin beta chain 9796
12 1Y8I 2 B, D Hemoglobin beta chain 9796
13 5C6E 2 B Hemoglobin subunit beta 9796
14 1S0H 2 B Hemoglobin beta chain 9793
15 1Y8H 2 B, D Hemoglobin beta chain 9796
16 2ZLX 2 B, D Hemoglobin subunit beta 9796
17 2ZLW 2 B, D Hemoglobin subunit beta 9796
18 2DHB 2 B HEMOGLOBIN (DEOXY) (BETA CHAIN) 9796