Sequence Similarity Clusters for the Entities in PDB 1G0B

Entity #1 | Chains: A
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 17 2831
95 % 5 18 3027 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 5 18 3084
70 % 90 337 18
50 % 220 765 5
40 % 221 770 8
30 % 602 1324 6
Entity #2 | Chains: B
HEMOGLOBIN BETA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 17 2830
95 % 5 18 3011 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 5 18 3064
70 % 101 352 16
50 % 221 765 5
40 % 222 770 8
30 % 603 1324 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2D5X 1 A Hemoglobin alpha subunit 9796
2 1IWH 1 A Hemoglobin alpha chain 9796
3 1NS9 1 A Hemoglobin alpha subunit pH 7.1 Aquomet structure alpha subunit 9796
4 1IBE 1 A HEMOGLOBIN (DEOXY) 9796
5 1G0B 1 A HEMOGLOBIN ALPHA CHAIN 9796
6 2ZLT 1 A Hemoglobin subunit alpha 9796
7 1NS6 1 A Hemoglobin alpha subunit pH 5.4 Hemichrome Structure alpha subunit 9796
8 2ZLU 1 A Hemoglobin subunit alpha 9796
9 2ZLV 1 A Hemoglobin subunit alpha 9796
10 2MHB 1 A HEMOGLOBIN (AQUO MET) (ALPHA CHAIN) 9796
11 1Y8K 1 A, C Hemoglobin alpha chains PH 7.0 AQUOMET STRUCTURE 9796
12 1Y8I 1 A, C Hemoglobin alpha chains PH 7.0 AQUOMET STRUCTURE 9796
13 5C6E 1 A Hemoglobin subunit alpha 9796
14 1Y8H 1 A, C Hemoglobin alpha chains PH 7.0 AQUOMET STRUCTURE 9796
15 2ZLX 1 A, C Hemoglobin subunit alpha 9796
16 2ZLW 1 A, C Hemoglobin subunit alpha 9796
17 2DHB 1 A HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9796