Sequence Similarity Clusters for the Entities in PDB 1G0B

Entity #1 | Chains: A
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 17 2684
95 % 5 18 2892 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 5 18 2954
70 % 88 332 16
50 % 216 755 3
40 % 217 760 6
30 % 587 1299 6
Entity #2 | Chains: B
HEMOGLOBIN BETA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 17 2683
95 % 5 18 2876 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 5 18 2934
70 % 99 347 13
50 % 217 755 3
40 % 218 760 6
30 % 588 1299 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2D5X 1 A Hemoglobin alpha subunit 9796
2 1IWH 1 A Hemoglobin alpha chain 9796
3 1NS9 1 A Hemoglobin alpha subunit pH 7.1 Aquomet structure alpha subunit 9796
4 1IBE 1 A HEMOGLOBIN (DEOXY) 9796
5 1G0B 1 A HEMOGLOBIN ALPHA CHAIN 9796
6 2ZLT 1 A Hemoglobin subunit alpha 9796
7 1NS6 1 A Hemoglobin alpha subunit pH 5.4 Hemichrome Structure alpha subunit 9796
8 2ZLU 1 A Hemoglobin subunit alpha 9796
9 2ZLV 1 A Hemoglobin subunit alpha 9796
10 2MHB 1 A HEMOGLOBIN (AQUO MET) (ALPHA CHAIN) 9796
11 1Y8K 1 A, C Hemoglobin alpha chains PH 7.0 AQUOMET STRUCTURE 9796
12 1Y8I 1 A, C Hemoglobin alpha chains PH 7.0 AQUOMET STRUCTURE 9796
13 5C6E 1 A Hemoglobin subunit alpha 9796
14 1Y8H 1 A, C Hemoglobin alpha chains PH 7.0 AQUOMET STRUCTURE 9796
15 2ZLX 1 A, C Hemoglobin subunit alpha 9796
16 2ZLW 1 A, C Hemoglobin subunit alpha 9796
17 2DHB 1 A HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 9796