Sequence Similarity Clusters for the Entities in PDB 1G09

Entity #1 | Chains: A,C
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 2211
95 % 5 11 2854 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 6 16 1664
70 % 153 327 15
50 % 370 744 4
40 % 375 749 8
30 % 781 1198 8
Entity #2 | Chains: B,D
HEMOGLOBIN BETA CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 2208
95 % 6 12 2574 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 6 16 1663
70 % 168 341 12
50 % 371 744 4
40 % 376 749 8
30 % 782 1198 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.