Sequence Similarity Clusters for the Entities in PDB 1G09

Entity #1 | Chains: A,C
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 2309
95 % 5 11 2965 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 6 16 1743
70 % 156 332 16
50 % 376 754 4
40 % 381 759 8
30 % 804 1226 8
Entity #2 | Chains: B,D
HEMOGLOBIN BETA CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 2307
95 % 6 12 2682 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 6 16 1740
70 % 171 346 14
50 % 377 754 4
40 % 382 759 8
30 % 805 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures