Sequence Similarity Clusters for the Entities in PDB 1G08

Entity #1 | Chains: A,C
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 2249
95 % 3 11 2890 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 3 16 1680
70 % 104 332 14
50 % 254 754 4
40 % 255 759 8
30 % 615 1214 8
Entity #2 | Chains: B,D
HEMOGLOBIN BETA CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 2246
95 % 3 12 2609 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 3 16 1679
70 % 117 346 11
50 % 255 754 4
40 % 256 759 8
30 % 616 1214 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures