Sequence Similarity Clusters for the Entities in PDB 1FZO

Entity #1 | Chains: A
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 4248
95 % 8 65 360 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.1
PDBFlex
90 % 8 70 363
70 % 158 705 6
50 % 158 710 6
40 % 163 761 10
30 % 174 881 15
Entity #2 | Chains: B
PROTEIN (BETA-2-MICROGLOBULIN) protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 133 95
95 % 18 223 62 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 18 223 66
70 % 193 898 4
50 % 198 920 3
40 % 198 920 8
30 % 198 920 12
Entity #3 | Chains: P
PROTEIN (NUCLEOCAPSID PROTEIN) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.