Sequence Similarity Clusters for the Entities in PDB 1FZM

Entity #1 | Chains: A
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 8 4201
95 % 10 65 358
90 % 10 70 361
70 % 179 692 6
50 % 179 697 6
40 % 185 748 10
30 % 200 868 15
Entity #2 | Chains: B
PROTEIN (BETA-2-MICROGLOBULIN) protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 133 95
95 % 21 217 64
90 % 21 217 68
70 % 218 885 4
50 % 223 907 3
40 % 223 907 9
30 % 223 907 14
Entity #3 | Chains: P
PROTEIN (NUCLEOCAPSID PROTEIN) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.