Sequence Similarity Clusters for the Entities in PDB 1FZI

Entity #1 | Chains: A,B
METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN protein, length: 527 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 24 679
95 % 27 27 787
90 % 27 27 822
70 % 29 29 836
50 % 29 29 876
40 % 29 29 900
30 % 29 29 892
Entity #2 | Chains: C,D
METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 23 683
95 % 27 27 795
90 % 27 27 830
70 % 27 27 872
50 % 29 29 883
40 % 29 29 904
30 % 29 29 897
Entity #3 | Chains: E,F
METHANE MONOOXYGENASE COMPONENT A, GAMMA CHAIN protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 25 632
95 % 27 27 809
90 % 27 27 843
70 % 27 27 883
50 % 29 29 891
40 % 29 29 918
30 % 29 29 908

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.