Sequence Similarity Clusters for the Entities in PDB 1FZG

Entity #1 | Chains: A,D
FIBRINOGEN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 17 1158
95 % 4 17 1382 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 4 17 1405
70 % 4 17 1424
50 % 4 17 1470
40 % 4 17 1459
30 % 4 17 1449
Entity #2 | Chains: B,E
FIBRINOGEN protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 28 688
95 % 6 28 844 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 6 28 873
70 % 6 28 910
50 % 6 30 869
40 % 6 30 896
30 % 11 61 441
Entity #3 | Chains: C,F
FIBRINOGEN protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 18 1107
95 % 6 29 801 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 6 29 830
70 % 6 29 872
50 % 6 31 835
40 % 6 31 864
30 % 12 61 441
Entity #4 | Chains: M,N,S,T
FIBRINOGEN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures