Sequence Similarity Clusters for the Entities in PDB 1FZG

Entity #1 | Chains: A,D
FIBRINOGEN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 17 954
95 % 4 17 1316 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 4 17 1340
70 % 4 17 1357
50 % 4 17 1399
40 % 4 17 1417
30 % 4 17 1391
Entity #2 | Chains: B,E
FIBRINOGEN protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 25 648
95 % 6 28 781 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 6 28 808
70 % 6 28 853
50 % 6 30 796
40 % 6 30 832
30 % 11 61 374
Entity #3 | Chains: C,F
FIBRINOGEN protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 23 693
95 % 6 29 747 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 6 29 777
70 % 6 29 821
50 % 6 31 765
40 % 6 31 797
30 % 12 61 374
Entity #4 | Chains: M,N,S,T
FIBRINOGEN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.