Sequence Similarity Clusters for the Entities in PDB 1FZF

Entity #1 | Chains: A,D
FIBRINOGEN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 17 1045
95 % 7 17 1409 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 7 17 1435
70 % 7 17 1438
50 % 7 17 1492
40 % 7 17 1490
30 % 7 17 1471
Entity #2 | Chains: B,E
FIBRINOGEN protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 25 694
95 % 14 28 830 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 14 28 861
70 % 14 28 898
50 % 14 30 845
40 % 14 30 886
30 % 27 61 423
Entity #3 | Chains: C,F
FIBRINOGEN protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 23 740
95 % 14 29 788 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 14 29 821
70 % 14 29 862
50 % 14 31 819
40 % 14 31 858
30 % 28 61 423
Entity #4 | Chains: M,N,S,T
FIBRINOGEN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures