Sequence Similarity Clusters for the Entities in PDB 1FZF

Entity #1 | Chains: A,D
FIBRINOGEN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 17 973
95 % 7 17 1339 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 7 17 1365
70 % 7 17 1382
50 % 7 17 1429
40 % 7 17 1442
30 % 7 17 1418
Entity #2 | Chains: B,E
FIBRINOGEN protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 25 660
95 % 14 28 795 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 14 28 822
70 % 14 28 861
50 % 14 30 820
40 % 14 30 855
30 % 27 61 394
Entity #3 | Chains: C,F
FIBRINOGEN protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 23 711
95 % 14 29 756 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 14 29 788
70 % 14 29 829
50 % 14 31 789
40 % 14 31 825
30 % 28 61 394
Entity #4 | Chains: M,N,S,T
FIBRINOGEN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.