Sequence Similarity Clusters for the Entities in PDB 1FZC

Entity #1 | Chains: A,D
FIBRIN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 17 954
95 % 2 17 1316 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 2 17 1340
70 % 2 17 1357
50 % 2 17 1399
40 % 2 17 1417
30 % 2 17 1391
Entity #2 | Chains: B,E
FIBRIN protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 25 648
95 % 2 28 781 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 2 28 808
70 % 2 28 853
50 % 2 30 796
40 % 2 30 832
30 % 3 61 374
Entity #3 | Chains: C,F
FIBRIN protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 23 693
95 % 2 29 747 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 2 29 777
70 % 2 29 821
50 % 2 31 765
40 % 2 31 797
30 % 4 61 374
Entity #4 | Chains: G,H
FIBRIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: I,J
FIBRIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.