Sequence Similarity Clusters for the Entities in PDB 1FZC

Entity #1 | Chains: A,D
FIBRIN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 17 1024
95 % 2 17 1384 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 2 17 1411
70 % 2 17 1423
50 % 2 17 1469
40 % 2 17 1477
30 % 2 17 1448
Entity #2 | Chains: B,E
FIBRIN protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 25 685
95 % 2 28 821 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 2 28 853
70 % 2 28 889
50 % 2 30 837
40 % 2 30 877
30 % 3 61 420
Entity #3 | Chains: C,F
FIBRIN protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 23 732
95 % 2 29 781 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 2 29 813
70 % 2 29 849
50 % 2 31 808
40 % 2 31 848
30 % 4 61 420
Entity #4 | Chains: G,H
FIBRIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: I,J
FIBRIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures