Sequence Similarity Clusters for the Entities in PDB 1FZC

Entity #1 | Chains: A,D
FIBRIN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 17 993
95 % 2 17 1349 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 2 17 1376
70 % 2 17 1395
50 % 2 17 1442
40 % 2 17 1450
30 % 2 17 1426
Entity #2 | Chains: B,E
FIBRIN protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 25 669
95 % 2 28 800 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 2 28 828
70 % 2 28 867
50 % 2 30 827
40 % 2 30 863
30 % 3 61 399
Entity #3 | Chains: C,F
FIBRIN protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 23 719
95 % 2 29 762 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 2 29 794
70 % 2 29 836
50 % 2 31 799
40 % 2 31 837
30 % 4 61 399
Entity #4 | Chains: G,H
FIBRIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: I,J
FIBRIN protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.