Sequence Similarity Clusters for the Entities in PDB 1FZB

Entity #1 | Chains: A,D
FIBRINOGEN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 17 991
95 % 10 17 1348 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 10 17 1375
70 % 10 17 1393
50 % 10 17 1441
40 % 10 17 1450
30 % 10 17 1425
Entity #2 | Chains: B,E
FIBRINOGEN protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 25 666
95 % 20 28 799 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 20 28 827
70 % 20 28 867
50 % 21 30 827
40 % 21 30 863
30 % 41 61 399
Entity #3 | Chains: C,F
FIBRINOGEN protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 23 717
95 % 20 29 759 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 20 29 792
70 % 20 29 835
50 % 21 31 799
40 % 21 31 836
30 % 42 61 399
Entity #4 | Chains: G,H
PEPTIDE LIGAND GPRG protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.