Sequence Similarity Clusters for the Entities in PDB 1FZ5

Entity #1 | Chains: A,B
METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN protein, length: 527 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 25 853
95 % 23 27 980 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 23 27 1006
70 % 25 29 1009
50 % 25 29 1055
40 % 25 29 1065
30 % 25 29 1055
Entity #2 | Chains: C,D
METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 23 966
95 % 23 27 981 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 23 27 1007
70 % 23 27 1042
50 % 25 29 1056
40 % 25 29 1066
30 % 25 29 1056
Entity #3 | Chains: E,F
METHANE MONOOXYGENASE COMPONENT A, GAMMA CHAIN protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 25 868
95 % 23 27 982 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 23 27 1008
70 % 23 27 1043
50 % 25 29 1057
40 % 25 29 1067
30 % 25 29 1057

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1MTY 2 B, C METHANE MONOOXYGENASE HYDROXYLASE 414 1.14.13.25 | Details
2 1XVB 2 C, D Methane monooxygenase component A beta chain 414 1.14.13.25 | Details
3 1XVG 2 C, D Methane monooxygenase component A beta chain beta subunit 414 1.14.13.25 | Details
4 1XU5 2 C, D Methane monooxygenase component A beta chain beta subunit 414 1.14.13.25 | Details
5 1FZ1 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
6 1XVF 2 C, D Methane monooxygenase component A beta chain beta subunit 414 1.14.13.25 | Details
7 1FZ3 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
8 1FZ7 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
9 1XVC 2 C, D Methane monooxygenase component A beta chain beta subunit 414 1.14.13.25 | Details
10 1FZ0 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
11 1MMO 1 B, C METHANE MONOOXYGENASE HYDROLASE (BETA CHAIN) 414 1.14.13.25 | Details
12 1FYZ 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
13 1FZ8 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
14 1FZ2 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
15 1FZ6 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
16 1XMG 2 C, D Methane monooxygenase component A beta chain beta subunit 414 1.14.13.25 | Details
17 1XVD 2 C, D Methane monooxygenase component A beta chain beta subunit 414 1.14.13.25 | Details
18 1XMH 2 C, D Methane monooxygenase component A beta chain beta subunit 414 1.14.13.25 | Details
19 1XU3 2 C, D Methane monooxygenase component A beta chain beta subunit 414 1.14.13.25 | Details
20 1FZ9 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
21 1XVE 2 C, D Methane monooxygenase component A beta chain beta subunit 414 1.14.13.25 | Details
22 1XMF 2 C, D Methane monooxygenase component A beta chain beta subunit 414 1.14.13.25 | Details
23 1FZ5 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
24 1FZ4 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
25 1FZH 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details
26 4GAM 1 B, G, L, Q Methane monooxygenase component A beta chain 414 1.14.13.25 | Details
27 1FZI 2 C, D METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN 414 1.14.13.25 | Details