Sequence Similarity Clusters for the Entities in PDB 1FZ5

Entity #1 | Chains: A,B
METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN protein, length: 527 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 25 900
95 % 23 27 1037 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 23 27 1063
70 % 25 29 1052
50 % 25 29 1101
40 % 25 29 1105
30 % 25 29 1093
Entity #2 | Chains: C,D
METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 23 1015
95 % 23 27 1038 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 23 27 1064
70 % 23 27 1085
50 % 25 29 1102
40 % 25 29 1106
30 % 25 29 1094
Entity #3 | Chains: E,F
METHANE MONOOXYGENASE COMPONENT A, GAMMA CHAIN protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 25 914
95 % 23 27 1039 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 23 27 1065
70 % 23 27 1086
50 % 25 29 1103
40 % 25 29 1107
30 % 25 29 1095

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1MTY 1 D, E METHANE MONOOXYGENASE HYDROXYLASE 414 1.14.13.25 | Details
2 1MHY 2 D METHANE MONOOXYGENASE HYDROXYLASE 426 1.14.13.25 | Details
3 1XVB 1 A, B Methane monooxygenase component A alpha chain 414 1.14.13.25 | Details
4 1XVG 1 A, B Methane monooxygenase component A alpha chain alpha subunit 414 1.14.13.25 | Details
5 1XU5 1 A, B Methane monooxygenase component A alpha chain alpha subunit 414 1.14.13.25 | Details
6 1FZ1 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
7 1XVF 1 A, B Methane monooxygenase component A alpha chain alpha subunit 414 1.14.13.25 | Details
8 1FZ3 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
9 1FZ7 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
10 1XVC 1 A, B Methane monooxygenase component A alpha chain alpha subunit 414 1.14.13.25 | Details
11 1FZ0 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
12 1MMO 2 D, E METHANE MONOOXYGENASE HYDROLASE (ALPHA CHAIN) 414 1.14.13.25 | Details
13 1FYZ 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
14 1FZ8 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
15 1FZ2 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
16 1FZ6 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
17 1XMG 1 A, B Methane monooxygenase component A alpha chain alpha subunit 414 1.14.13.25 | Details
18 1XVD 1 A, B Methane monooxygenase component A alpha chain alpha subunit 414 1.14.13.25 | Details
19 1XMH 1 A, B Methane monooxygenase component A alpha chain alpha subunit 414 1.14.13.25 | Details
20 1XU3 1 A, B Methane monooxygenase component A alpha chain alpha subunit 414 1.14.13.25 | Details
21 1FZ9 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
22 1MHZ 2 D METHANE MONOOXYGENASE HYDROXYLASE 426 1.14.13.25 | Details
23 1XVE 1 A, B Methane monooxygenase component A alpha chain alpha subunit 414 1.14.13.25 | Details
24 1XMF 1 A, B Methane monooxygenase component A alpha chain alpha subunit 414 1.14.13.25 | Details
25 1FZ5 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
26 1FZ4 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
27 1FZH 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details
28 4GAM 2 A, F, K, P Methane monooxygenase component A alpha chain 414 1.14.13.25 | Details
29 1FZI 1 A, B METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN 414 1.14.13.25 | Details