Sequence Similarity Clusters for the Entities in PDB 1FZ2

Entity #1 | Chains: A,B
METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN protein, length: 527 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 25 811
95 % 14 27 930 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 14 27 958
70 % 15 29 958
50 % 15 29 1009
40 % 15 29 1017
30 % 15 29 1001
Entity #2 | Chains: C,D
METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 23 912
95 % 14 27 931 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 14 27 959
70 % 14 27 991
50 % 15 29 1010
40 % 15 29 1018
30 % 15 29 1002
Entity #3 | Chains: E,F
METHANE MONOOXYGENASE COMPONENT A, GAMMA CHAIN protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 25 822
95 % 14 27 932 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 14 27 960
70 % 14 27 992
50 % 15 29 1011
40 % 15 29 1019
30 % 15 29 1003

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures