Sequence Similarity Clusters for the Entities in PDB 1FYZ

Entity #1 | Chains: A,B
METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN protein, length: 527 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 24 756
95 % 12 27 878
90 % 12 27 912
70 % 13 29 913
50 % 13 29 962
40 % 13 29 989
30 % 13 29 959
Entity #2 | Chains: C,D
METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 23 762
95 % 12 27 886
90 % 12 27 920
70 % 12 27 953
50 % 13 29 967
40 % 13 29 992
30 % 13 29 962
Entity #3 | Chains: E,F
METHANE MONOOXYGENASE COMPONENT A, GAMMA CHAIN protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 25 715
95 % 12 27 903
90 % 12 27 935
70 % 12 27 963
50 % 13 29 976
40 % 13 29 1002
30 % 13 29 970

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.