Sequence Similarity Clusters for the Entities in PDB 1FYT

Entity #1 | Chains: A
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 47 69 234
95 % 53 76 309
90 % 60 92 238
70 % 60 92 271
50 % 85 142 181
40 % 85 142 194
30 % 175 296 100
Entity #2 | Chains: B
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-1 BETA CHAIN protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 38 537
95 % 31 41 671
90 % 52 73 335
70 % 82 133 168
50 % 85 142 180
40 % 85 142 193
30 % 176 296 100
Entity #3 | Chains: C
HEMAGGLUTININ HA1 PEPTIDE CHAIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
T-CELL RECEPTOR ALPHA CHAIN protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38746
95 % 3 3 21821
90 % 3 3 21134
70 % 9 25 1238
50 % 148 285 82
40 % 148 285 101
30 % 3094 5126 1
Entity #5 | Chains: E
T-CELL RECEPTOR BETA CHAIN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36592
95 % 3 3 21368
90 % 5 7 7194
70 % 156 295 43
50 % 156 298 75
40 % 156 298 91
30 % 3095 5126 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.