Sequence Similarity Clusters for the Entities in PDB 1FYL

Entity #1 | Chains: C,D
HEAD-TO-HEAD HSE dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
HEAT SHOCK FACTOR PROTEIN protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 6778
95 % 5 9 4917 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.1
PDBFlex
90 % 5 9 4933
70 % 5 9 4819
50 % 5 9 4619
40 % 5 9 4389
30 % 5 9 4032

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.