Sequence Similarity Clusters for the Entities in PDB 1FYD

Entity #1 | Chains: A,B
NH(3)-DEPENDENT NAD(+) SYNTHETASE protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 3955
95 % 6 7 4738 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 6 7 4762
70 % 8 10 2821
50 % 15 22 1426
40 % 16 24 1299
30 % 18 29 1025

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.