Sequence Similarity Clusters for the Entities in PDB 1FYD

Entity #1 | Chains: A,B
NH(3)-DEPENDENT NAD(+) SYNTHETASE protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 4125
95 % 6 7 4931 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 6 7 4960
70 % 8 10 2926
50 % 15 23 1221
40 % 16 25 1149
30 % 18 30 940

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures