Sequence Similarity Clusters for the Entities in PDB 1FY8

Entity #1 | Chains: E
TRYPSIN II, ANIONIC protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 15569
95 % 8 36 1363 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 8 36 1389
70 % 301 547 18
50 % 318 698 14
40 % 569 1720 4
30 % 594 1870 6
Entity #2 | Chains: I
PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 44 367
95 % 25 90 256 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 30 95 260
70 % 38 115 177
50 % 45 149 184
40 % 46 163 179
30 % 46 163 191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures