Sequence Similarity Clusters for the Entities in PDB 1FY8

Entity #1 | Chains: E
TRYPSIN II, ANIONIC protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27686
95 % 8 36 1408 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 8 36 1431
70 % 304 558 19
50 % 321 709 14
40 % 602 1884 4
30 % 602 1898 7
Entity #2 | Chains: I
PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 70 259
95 % 29 91 264 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 30 95 265
70 % 38 115 182
50 % 45 149 188
40 % 46 164 190
30 % 46 164 208

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures