Sequence Similarity Clusters for the Entities in PDB 1FY8

Entity #1 | Chains: E
TRYPSIN II, ANIONIC protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 14856
95 % 8 36 1310 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 8 36 1338
70 % 288 526 18
50 % 305 677 14
40 % 553 1682 4
30 % 578 1831 6
Entity #2 | Chains: I
PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 44 315
95 % 25 90 238 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 30 95 241
70 % 38 115 173
50 % 45 148 173
40 % 46 162 172
30 % 46 162 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.