Sequence Similarity Clusters for the Entities in PDB 1FXW

Entity #1 | Chains: A
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39586
95 % 7 9 7795 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 7 9 7745
70 % 7 9 7535
50 % 7 11 3094
40 % 7 11 3023
30 % 7 11 2834
Entity #2 | Chains: F
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 5748
95 % 1 2 6408 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.1
PDBFlex
90 % 1 2 6392
70 % 1 2 6243
50 % 8 11 3094
40 % 8 11 3023
30 % 8 11 2834

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1ES9 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT 9913 3.1.1.47 | Details
2 1WAB 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE WITH ACETATE BOUND 9913 3.1.1.47 | Details
3 3DT8 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
4 3DT9 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
5 3DT6 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
6 1BWP 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
7 1FXW 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT 9913 3.1.1.47 | Details
8 1FXW 2 F PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT 9913 3.1.1.47 | Details
9 1BWQ 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
10 1BWR 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
11 1VYH 1 A, B, E, F, I, J, M, N, Q, R PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT 9606 3.1.1.47 | Details