Sequence Similarity Clusters for the Entities in PDB 1FXW

Entity #1 | Chains: A
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 12535
95 % 7 9 7978 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 7 9 7902
70 % 7 9 7643
50 % 7 11 3265
40 % 7 11 3153
30 % 7 11 2910
Entity #2 | Chains: F
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 6642
95 % 1 2 6789 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.1
PDBFlex
90 % 1 2 6779
70 % 1 2 6573
50 % 8 11 3265
40 % 8 11 3153
30 % 8 11 2910

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1ES9 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT 9913 3.1.1.47 | Details
2 1WAB 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE WITH ACETATE BOUND 9913 3.1.1.47 | Details
3 3DT8 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
4 3DT9 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
5 3DT6 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
6 1BWP 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
7 1FXW 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT 9913 3.1.1.47 | Details
8 1FXW 2 F PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT 9913 3.1.1.47 | Details
9 1BWQ 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
10 1BWR 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
11 1VYH 1 A, B, E, F, I, J, M, N, Q, R PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT 9606 3.1.1.47 | Details