Sequence Similarity Clusters for the Entities in PDB 1FXW

Entity #1 | Chains: A
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 13247
95 % 7 9 8442 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 7 9 8356
70 % 7 9 8084
50 % 7 11 3432
40 % 7 11 3301
30 % 7 11 3040
Entity #2 | Chains: F
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 7052
95 % 1 2 7185 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.1
PDBFlex
90 % 1 2 7148
70 % 1 2 6924
50 % 8 11 3432
40 % 8 11 3301
30 % 8 11 3040

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1ES9 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT 9913 3.1.1.47 | Details
2 1WAB 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE WITH ACETATE BOUND 9913 3.1.1.47 | Details
3 3DT8 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
4 3DT9 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
5 3DT6 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
6 1BWP 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
7 1FXW 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT 9913 3.1.1.47 | Details
8 1FXW 2 F PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT 9913 3.1.1.47 | Details
9 1BWQ 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
10 1BWR 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
11 1VYH 1 A, B, E, F, I, J, M, N, Q, R PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT 9606 3.1.1.47 | Details