Sequence Similarity Clusters for the Entities in PDB 1FXW

Entity #1 | Chains: A
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 12697
95 % 7 9 8079 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 7 9 8008
70 % 7 9 7747
50 % 7 11 3301
40 % 7 11 3183
30 % 7 11 2932
Entity #2 | Chains: F
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 6739
95 % 1 2 6875 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.1
PDBFlex
90 % 1 2 6863
70 % 1 2 6659
50 % 8 11 3301
40 % 8 11 3183
30 % 8 11 2932

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1ES9 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT 9913 3.1.1.47 | Details
2 1WAB 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE WITH ACETATE BOUND 9913 3.1.1.47 | Details
3 3DT8 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
4 3DT9 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
5 3DT6 1 A Brain Platelet-activating factor acetylhydrolase IB subunit alpha 9913 3.1.1.47 | Details
6 1BWP 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
7 1FXW 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT 9913 3.1.1.47 | Details
8 1FXW 2 F PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT 9913 3.1.1.47 | Details
9 1BWQ 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
10 1BWR 1 A PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 9913 3.1.1.47 | Details
11 1VYH 1 A, B, E, F, I, J, M, N, Q, R PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT 9606 3.1.1.47 | Details