Sequence Similarity Clusters for the Entities in PDB 1FXW

Entity #1 | Chains: A
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39416
95 % 7 9 7765 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 7 9 7716
70 % 7 9 7508
50 % 7 11 3080
40 % 7 11 3012
30 % 7 11 2824
Entity #2 | Chains: F
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 5720
95 % 1 2 6382 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.1
PDBFlex
90 % 1 2 6365
70 % 1 2 6218
50 % 8 11 3080
40 % 8 11 3012
30 % 8 11 2824

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.