Sequence Similarity Clusters for the Entities in PDB 1FXW

Entity #1 | Chains: A
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB GAMMA SUBUNIT protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 13024
95 % 7 9 8265 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 7 9 8188
70 % 7 9 7939
50 % 7 11 3374
40 % 7 11 3252
30 % 7 11 2996
Entity #2 | Chains: F
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 6904
95 % 1 2 7038 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.1
PDBFlex
90 % 1 2 7011
70 % 1 2 6811
50 % 8 11 3374
40 % 8 11 3252
30 % 8 11 2996

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures