Sequence Similarity Clusters for the Entities in PDB 1FXL

Entity #1 | Chains: B
5'-R(P*UP*UP*UP*UP*AP*UP*UP*UP*U)-3' rna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 42844
95 % 1 2 32416
90 % 1 3 22660
70 % 1 5 11682
50 % 1 5 10418
40 % 1 8 4562
30 % 1 13 3125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.