Sequence Similarity Clusters for the Entities in PDB 1FWJ

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 31 1313
95 % 22 31 1774 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 22 31 1813
70 % 35 44 1228
50 % 36 46 1044
40 % 36 46 1055
30 % 36 46 1034
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 31 1311
95 % 22 31 1772
90 % 22 31 1811
70 % 22 31 1834
50 % 22 31 1851
40 % 22 31 1860
30 % 22 31 1797
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 10 5823
95 % 22 31 1735 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 22 31 1769
70 % 22 31 1791
50 % 35 49 902
40 % 35 49 928
30 % 35 49 909

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.