Sequence Similarity Clusters for the Entities in PDB 1FWJ

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 31 1417
95 % 22 31 1912 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 22 31 1957
70 % 36 45 1254
50 % 37 47 1081
40 % 37 47 1093
30 % 37 47 1074
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 31 1415
95 % 22 31 1910 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 22 31 1955
70 % 22 31 1970
50 % 22 31 1987
40 % 22 31 1985
30 % 22 31 1912
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 10 6210
95 % 22 31 1866 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 22 31 1905
70 % 22 31 1924
50 % 36 50 926
40 % 36 50 953
30 % 36 50 938

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures