Sequence Similarity Clusters for the Entities in PDB 1FWF

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 1607
95 % 13 31 1897 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 13 31 1935
70 % 26 45 1275
50 % 26 47 1085
40 % 26 47 1098
30 % 26 47 1086
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 1610
95 % 13 31 1895 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 13 31 1934
70 % 13 31 1954
50 % 13 31 2019
40 % 13 31 1996
30 % 13 31 1904
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 5169
95 % 13 31 1929 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 13 31 1968
70 % 13 31 1985
50 % 26 50 947
40 % 26 50 968
30 % 26 50 954

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5OL4 3 C Urease subunit alpha 1474 3.5.1.5 | Details
2 4AC7 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
3 5G4H 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
4 4CEX 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
5 4CEU 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
6 4UBP 3 C PROTEIN (UREASE (CHAIN C)) 1474 3.5.1.5 | Details
7 5A6T 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
8 4EP8 1 C Urease subunit alpha 548 3.5.1.5 | Details
9 1EJX 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
10 1UBP 3 C UREASE 1474 3.5.1.5 | Details
11 4EPD 1 C Urease subunit alpha 548 3.5.1.5 | Details
12 5FSD 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
13 4EPB 1 C Urease subunit alpha 548 3.5.1.5 | Details
14 1EJW 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
15 1IE7 3 C UREASE ALPHA SUBUNIT 1474 3.5.1.5 | Details
16 3UBP 3 C PROTEIN (UREASE ALPHA SUBUNIT) 1474 3.5.1.5 | Details
17 2UBP 3 C PROTEIN (UREASE ALPHA SUBUNIT) 1474 3.5.1.5 | Details
18 1EJR 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
19 5FSE 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
20 4EPE 1 C Urease subunit alpha 548 3.5.1.5 | Details
21 1FWC 3 C UREASE PH 8.5 548 3.5.1.5 | Details
22 1FWA 3 C UREASE PH 7.5 548 3.5.1.5 | Details
23 1FWB 3 C UREASE PH 6.5 548 3.5.1.5 | Details
24 1FWD 3 C UREASE PH 9.4 548 3.5.1.5 | Details
25 1FWI 3 C UREASE 548 3.5.1.5 | Details
26 1FWF 3 C UREASE 548 3.5.1.5 | Details
27 1EJT 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
28 1FWG 3 C UREASE 548 3.5.1.5 | Details
29 1FWH 3 C UREASE 548 3.5.1.5 | Details
30 1EJS 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
31 2KAU 3 C UREASE (ALPHA CHAIN) 548 3.5.1.5 | Details
32 1EJU 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
33 1A5M 3 C UREASE (ALPHA SUBUNIT) 548 3.5.1.5 | Details
34 1S3T 3 C Urease alpha subunit 1474 3.5.1.5 | Details
35 1FWE 3 C UREASE INHIBITOR BOUND 548 3.5.1.5 | Details
36 1FWJ 3 C UREASE 548 3.5.1.5 | Details
37 1A5K 3 C UREASE (ALPHA SUBUNIT) 548 3.5.1.5 | Details
38 1A5L 3 C UREASE (ALPHA SUBUNIT) 548 3.5.1.5 | Details
39 1A5N 3 C UREASE (ALPHA SUBUNIT) 548 3.5.1.5 | Details
40 1KRA 3 C UREASE 548 3.5.1.5 | Details
41 1EJV 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
42 1EF2 1 A UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
43 1KRB 3 C UREASE 548 3.5.1.5 | Details
44 1KRC 3 C UREASE 548 3.5.1.5 | Details
45 1A5O 3 C UREASE (ALPHA SUBUNIT) 548 3.5.1.5 | Details
46 3QGA 2 C, F, I, L, O, R Urease subunit beta 2 217 3.5.1.5 | Details
47 3QGK 2 C, F, I, L, O, R Urease subunit beta 2 217 3.5.1.5 | Details
48 1E9Z 2 B UREASE SUBUNIT BETA 210 3.5.1.5 | Details
49 1E9Y 2 B UREASE SUBUNIT BETA 210 3.5.1.5 | Details
50 4Z42 3 C, F, I, L Urease subunit alpha 630 3.5.1.5 | Details