Sequence Similarity Clusters for the Entities in PDB 1FWF

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 1673
95 % 13 31 1968 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 13 31 2006
70 % 26 45 1323
50 % 26 47 1119
40 % 26 47 1126
30 % 26 47 1110
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 1677
95 % 13 31 1966 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 13 31 2005
70 % 13 31 2031
50 % 13 31 2094
40 % 13 31 2068
30 % 13 31 1964
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 5373
95 % 13 31 1997 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 13 31 2037
70 % 13 31 2060
50 % 26 50 978
40 % 26 50 1002
30 % 26 50 989

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1EJX 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
2 1EJW 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
3 1EJR 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
4 1FWC 3 C UREASE PH 8.5 548 3.5.1.5 | Details
5 1FWA 3 C UREASE PH 7.5 548 3.5.1.5 | Details
6 1FWB 3 C UREASE PH 6.5 548 3.5.1.5 | Details
7 1FWD 3 C UREASE PH 9.4 548 3.5.1.5 | Details
8 1FWF 3 C UREASE 548 3.5.1.5 | Details
9 1FWG 3 C UREASE 548 3.5.1.5 | Details
10 2KAU 3 C UREASE (ALPHA CHAIN) 548 3.5.1.5 | Details
11 1FWE 3 C UREASE INHIBITOR BOUND 548 3.5.1.5 | Details
12 1FWJ 3 C UREASE 548 3.5.1.5 | Details
13 1KRA 3 C UREASE 548 3.5.1.5 | Details