Sequence Similarity Clusters for the Entities in PDB 1FWF

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 1619
95 % 13 31 1908 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 13 31 1947
70 % 26 45 1287
50 % 26 47 1094
40 % 26 47 1104
30 % 26 47 1091
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 1623
95 % 13 31 1906 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 13 31 1946
70 % 13 31 1969
50 % 13 31 2036
40 % 13 31 2006
30 % 13 31 1913
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 5206
95 % 13 31 1939 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 13 31 1978
70 % 13 31 1998
50 % 26 50 953
40 % 26 50 974
30 % 26 50 962

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4EP8 2 B Urease subunit beta 548 3.5.1.5 | Details
2 1EJX 2 B UREASE BETA SUBUNIT 548 3.5.1.5 | Details
3 4EPD 2 B Urease subunit beta 548 3.5.1.5 | Details
4 4EPB 2 B Urease subunit beta 548 3.5.1.5 | Details
5 1EJW 2 B UREASE BETA SUBUNIT 548 3.5.1.5 | Details
6 1EJR 2 B UREASE BETA SUBUNIT 548 3.5.1.5 | Details
7 4EPE 2 B Urease subunit beta 548 3.5.1.5 | Details
8 1FWC 2 B UREASE PH 8.5 548 3.5.1.5 | Details
9 1FWA 2 B UREASE PH 7.5 548 3.5.1.5 | Details
10 1FWB 2 B UREASE PH 6.5 548 3.5.1.5 | Details
11 1FWD 2 B UREASE PH 9.4 548 3.5.1.5 | Details
12 1FWI 2 B UREASE 548 3.5.1.5 | Details
13 1FWF 2 B UREASE 548 3.5.1.5 | Details
14 1EJT 2 B UREASE BETA SUBUNIT 548 3.5.1.5 | Details
15 1FWG 2 B UREASE 548 3.5.1.5 | Details
16 1FWH 2 B UREASE 548 3.5.1.5 | Details
17 1EJS 2 B UREASE BETA SUBUNIT 548 3.5.1.5 | Details
18 2KAU 2 B UREASE (BETA CHAIN) 548 3.5.1.5 | Details
19 1EJU 2 B UREASE BETA SUBUNIT 548 3.5.1.5 | Details
20 1A5M 2 B UREASE (BETA SUBUNIT) 548 3.5.1.5 | Details
21 1FWE 2 B UREASE INHIBITOR BOUND 548 3.5.1.5 | Details
22 1FWJ 2 B UREASE 548 3.5.1.5 | Details
23 1A5K 2 B UREASE (BETA SUBUNIT) 548 3.5.1.5 | Details
24 1A5L 2 B UREASE (BETA SUBUNIT) 548 3.5.1.5 | Details
25 1A5N 2 B UREASE (BETA SUBUNIT) 548 3.5.1.5 | Details
26 1KRA 2 B UREASE 548 3.5.1.5 | Details
27 1EJV 2 B UREASE BETA SUBUNIT 548 3.5.1.5 | Details
28 1EF2 2 B UREASE BETA SUBUNIT 548 3.5.1.5 | Details
29 1KRB 2 B UREASE 548 3.5.1.5 | Details
30 1KRC 2 B UREASE 548 3.5.1.5 | Details
31 1A5O 2 B UREASE (BETA SUBUNIT) 548 3.5.1.5 | Details