Sequence Similarity Clusters for the Entities in PDB 1FWF

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 1619
95 % 13 31 1908 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 13 31 1947
70 % 26 45 1287
50 % 26 47 1094
40 % 26 47 1104
30 % 26 47 1091
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 1623
95 % 13 31 1906 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 13 31 1946
70 % 13 31 1969
50 % 13 31 2036
40 % 13 31 2006
30 % 13 31 1913
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 5206
95 % 13 31 1939 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 13 31 1978
70 % 13 31 1998
50 % 26 50 953
40 % 26 50 974
30 % 26 50 962

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5OL4 1 A Urease subunit gamma 1474 3.5.1.5 | Details
2 4AC7 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
3 5G4H 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
4 4CEX 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
5 4CEU 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
6 4UBP 1 A PROTEIN (UREASE (CHAIN A)) 1474 3.5.1.5 | Details
7 5A6T 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
8 4EP8 3 A Urease subunit gamma 548 3.5.1.5 | Details
9 1EJX 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
10 1UBP 1 A UREASE 1474 3.5.1.5 | Details
11 4EPD 3 A Urease subunit gamma 548 3.5.1.5 | Details
12 5FSD 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
13 4EPB 3 A Urease subunit gamma 548 3.5.1.5 | Details
14 1EJW 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
15 1IE7 1 A UREASE GAMMA SUBUNIT 1474 3.5.1.5 | Details
16 3UBP 1 A PROTEIN (UREASE GAMMA SUBUNIT) 1474 3.5.1.5 | Details
17 2UBP 1 A PROTEIN (UREASE GAMMA SUBUNIT) 1474 3.5.1.5 | Details
18 1EJR 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
19 5FSE 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
20 4EPE 3 A Urease subunit gamma 548 3.5.1.5 | Details
21 1FWC 1 A UREASE PH 8.5 548 3.5.1.5 | Details
22 1FWA 1 A UREASE PH 7.5 548 3.5.1.5 | Details
23 1FWB 1 A UREASE PH 6.5 548 3.5.1.5 | Details
24 1FWD 1 A UREASE PH 9.4 548 3.5.1.5 | Details
25 1FWI 1 A UREASE 548 3.5.1.5 | Details
26 1FWF 1 A UREASE 548 3.5.1.5 | Details
27 1EJT 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
28 1FWG 1 A UREASE 548 3.5.1.5 | Details
29 4FUR 1 A, B, C, D, E, F Urease subunit gamma 2 235 3.5.1.5 | Details
30 1FWH 1 A UREASE 548 3.5.1.5 | Details
31 1EJS 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
32 2KAU 1 A UREASE (GAMMA CHAIN) 548 3.5.1.5 | Details
33 1EJU 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
34 1A5M 1 A UREASE (GAMMA SUBUNIT) 548 3.5.1.5 | Details
35 1S3T 1 A Urease gamma subunit 1474 3.5.1.5 | Details
36 1FWE 1 A UREASE INHIBITOR BOUND 548 3.5.1.5 | Details
37 1FWJ 1 A UREASE 548 3.5.1.5 | Details
38 1A5K 1 A UREASE (GAMMA SUBUNIT) 548 3.5.1.5 | Details
39 1A5L 1 A UREASE (GAMMA SUBUNIT) 548 3.5.1.5 | Details
40 1A5N 1 A UREASE (GAMMA SUBUNIT) 548 3.5.1.5 | Details
41 1KRA 1 A UREASE 548 3.5.1.5 | Details
42 1EJV 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
43 1EF2 3 C UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
44 1KRB 1 A UREASE 548 3.5.1.5 | Details
45 1KRC 1 A UREASE 548 3.5.1.5 | Details
46 1A5O 1 A UREASE (GAMMA SUBUNIT) 548 3.5.1.5 | Details
47 4Z42 1 A, D, G, J Urease subunit gamma 630 3.5.1.5 | Details