Sequence Similarity Clusters for the Entities in PDB 1FWF

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 1375
95 % 13 31 1840 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 13 31 1880
70 % 25 44 1267
50 % 25 46 1084
40 % 25 46 1093
30 % 25 46 1073
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 1373
95 % 13 31 1838 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 13 31 1878
70 % 13 31 1905
50 % 13 31 1931
40 % 13 31 1935
30 % 13 31 1866
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51601
95 % 13 31 1797 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 13 31 1836
70 % 13 31 1861
50 % 25 49 930
40 % 25 49 958
30 % 25 49 933

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4AC7 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
2 5G4H 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
3 4CEX 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
4 4CEU 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
5 4UBP 1 A PROTEIN (UREASE (CHAIN A)) 1474 3.5.1.5 | Details
6 5A6T 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
7 4EP8 3 A Urease subunit gamma 548 3.5.1.5 | Details
8 1EJX 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
9 1UBP 1 A UREASE 1474 3.5.1.5 | Details
10 4EPD 3 A Urease subunit gamma 548 3.5.1.5 | Details
11 5FSD 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
12 4EPB 3 A Urease subunit gamma 548 3.5.1.5 | Details
13 1EJW 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
14 1IE7 1 A UREASE GAMMA SUBUNIT 1474 3.5.1.5 | Details
15 3UBP 1 A PROTEIN (UREASE GAMMA SUBUNIT) 1474 3.5.1.5 | Details
16 2UBP 1 A PROTEIN (UREASE GAMMA SUBUNIT) 1474 3.5.1.5 | Details
17 1EJR 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
18 5FSE 1 A UREASE SUBUNIT GAMMA 1474 3.5.1.5 | Details
19 4EPE 3 A Urease subunit gamma 548 3.5.1.5 | Details
20 1FWC 1 A UREASE PH 8.5 548 3.5.1.5 | Details
21 1FWA 1 A UREASE PH 7.5 548 3.5.1.5 | Details
22 1FWB 1 A UREASE PH 6.5 548 3.5.1.5 | Details
23 1FWD 1 A UREASE PH 9.4 548 3.5.1.5 | Details
24 1FWI 1 A UREASE 548 3.5.1.5 | Details
25 1FWF 1 A UREASE 548 3.5.1.5 | Details
26 1EJT 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
27 1FWG 1 A UREASE 548 3.5.1.5 | Details
28 4FUR 1 A, B, C, D, E, F Urease subunit gamma 2 235 3.5.1.5 | Details
29 1FWH 1 A UREASE 548 3.5.1.5 | Details
30 1EJS 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
31 2KAU 1 A UREASE (GAMMA CHAIN) 548 3.5.1.5 | Details
32 1EJU 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
33 1A5M 1 A UREASE (GAMMA SUBUNIT) 548 3.5.1.5 | Details
34 1S3T 1 A Urease gamma subunit 1474 3.5.1.5 | Details
35 1FWE 1 A UREASE INHIBITOR BOUND 548 3.5.1.5 | Details
36 1FWJ 1 A UREASE 548 3.5.1.5 | Details
37 1A5K 1 A UREASE (GAMMA SUBUNIT) 548 3.5.1.5 | Details
38 1A5L 1 A UREASE (GAMMA SUBUNIT) 548 3.5.1.5 | Details
39 1A5N 1 A UREASE (GAMMA SUBUNIT) 548 3.5.1.5 | Details
40 1KRA 1 A UREASE 548 3.5.1.5 | Details
41 1EJV 3 A UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
42 1EF2 3 C UREASE GAMMA SUBUNIT 548 3.5.1.5 | Details
43 1KRB 1 A UREASE 548 3.5.1.5 | Details
44 1KRC 1 A UREASE 548 3.5.1.5 | Details
45 1A5O 1 A UREASE (GAMMA SUBUNIT) 548 3.5.1.5 | Details
46 4Z42 1 A, D, G, J Urease subunit gamma 630 3.5.1.5 | Details