Sequence Similarity Clusters for the Entities in PDB 1FWD

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 31 1667
95 % 11 31 1963 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 11 31 2001
70 % 24 45 1316
50 % 24 47 1118
40 % 24 47 1127
30 % 24 47 1110
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 31 1671
95 % 11 31 1961 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 11 31 2000
70 % 11 31 2028
50 % 11 31 2090
40 % 11 31 2065
30 % 11 31 1961
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 13 5352
95 % 11 31 1990 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 11 31 2030
70 % 11 31 2056
50 % 24 50 976
40 % 24 50 999
30 % 24 50 986

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures