Sequence Similarity Clusters for the Entities in PDB 1FWD

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 31 1616
95 % 11 31 1905 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 11 31 1944
70 % 24 45 1283
50 % 24 47 1089
40 % 24 47 1102
30 % 24 47 1092
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 31 1619
95 % 11 31 1903 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 11 31 1943
70 % 11 31 1963
50 % 11 31 2026
40 % 11 31 2002
30 % 11 31 1910
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 13 5197
95 % 11 31 1936 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 11 31 1975
70 % 11 31 1993
50 % 24 50 952
40 % 24 50 973
30 % 24 50 962

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures