Sequence Similarity Clusters for the Entities in PDB 1FVU

Entity #1 | Chains: A,C
BOTROCETIN ALPHA CHAIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 16407
95 % 1 4 15293 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 4 15014
70 % 1 4 14072
50 % 4 28 1310
40 % 6 60 644
30 % 57 220 107
Entity #2 | Chains: B,D
BOTROCETIN BETA CHAIN protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 16467
95 % 1 4 15354
90 % 1 4 15074
70 % 1 4 14124
50 % 3 25 1555
40 % 7 60 644
30 % 58 220 107

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures