Sequence Similarity Clusters for the Entities in PDB 1FVU

Entity #1 | Chains: A,C
BOTROCETIN ALPHA CHAIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15773
95 % 1 4 14777 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 4 14508
70 % 1 4 13606
50 % 4 28 1268
40 % 6 60 626
30 % 57 220 99
Entity #2 | Chains: B,D
BOTROCETIN BETA CHAIN protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 15831
95 % 1 4 14838
90 % 1 4 14569
70 % 1 4 13657
50 % 3 25 1501
40 % 7 60 626
30 % 58 220 99

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.