Sequence Similarity Clusters for the Entities in PDB 1FVU

Entity #1 | Chains: A,C
BOTROCETIN ALPHA CHAIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 16124
95 % 1 4 15055 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 4 14786
70 % 1 4 13869
50 % 4 28 1293
40 % 6 60 637
30 % 57 220 104
Entity #2 | Chains: B,D
BOTROCETIN BETA CHAIN protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 16182
95 % 1 4 15116
90 % 1 4 14846
70 % 1 4 13920
50 % 3 25 1531
40 % 7 60 637
30 % 58 220 104

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures