Sequence Similarity Clusters for the Entities in PDB 1FVF

Entity #1 | Chains: A,B
SEC1 protein, length: 591 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 19655
95 % 3 3 17933 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 2.5
PDBFlex
90 % 3 3 17488
70 % 3 3 16203
50 % 9 9 5843
40 % 9 9 5455
30 % 10 10 4388

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1EPU 1 A S-SEC1 1051067
2 1FVH 1 A SEC1 1051067
3 1FVF 1 A, B SEC1 1051067