Sequence Similarity Clusters for the Entities in PDB 1FVF

Entity #1 | Chains: A,B
SEC1 protein, length: 591 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 16578
95 % 3 3 15388 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 2.8
PDBFlex
90 % 3 3 15099
70 % 3 3 14180
50 % 9 9 4964
40 % 9 9 4694
30 % 10 10 4058

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.