Sequence Similarity Clusters for the Entities in PDB 1FVF

Entity #1 | Chains: A,B
SEC1 protein, length: 591 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 16798
95 % 3 3 15576 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 2.5
PDBFlex
90 % 3 3 15288
70 % 3 3 14355
50 % 9 9 5031
40 % 9 9 4761
30 % 10 10 4110

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures