Sequence Similarity Clusters for the Entities in PDB 1FVE

Entity #1 | Chains: A,C
IGG1-KAPPA 4D5 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20081
95 % 52 154 72
90 % 302 644 3
70 % 862 1773 2
50 % 2141 4363 1
40 % 2141 4363 1
30 % 2444 5147 1
Entity #2 | Chains: B,D
IGG1-KAPPA 4D5 FAB (HEAVY CHAIN) protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 12044
95 % 9 12 3554
90 % 93 199 60
70 % 1039 2109 1
50 % 2142 4363 1
40 % 2142 4363 1
30 % 2445 5147 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.