Sequence Similarity Clusters for the Entities in PDB 1FVD

Entity #1 | Chains: A,C
IGG1-KAPPA 4D5 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 19419
95 % 45 152 70
90 % 257 618 3
70 % 734 1710 2
50 % 1804 4166 1
40 % 1804 4167 1
30 % 2019 4915 1
Entity #2 | Chains: B,D
IGG1-KAPPA 4D5 FAB (HEAVY CHAIN) protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36660
95 % 8 12 3436
90 % 76 186 60
70 % 874 2016 1
50 % 1805 4166 1
40 % 1805 4167 1
30 % 2020 4915 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.