Sequence Similarity Clusters for the Entities in PDB 1FVC

Entity #1 | Chains: A,C
IGG1-KAPPA 4D5 FV (LIGHT CHAIN) protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46198
95 % 2 4 9747 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 4 9640
70 % 86 191 72
50 % 129 305 21
40 % 374 916 5
30 % 420 1042 7
Entity #2 | Chains: B,D
IGG1-KAPPA 4D5 FV (HEAVY CHAIN) protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45619
95 % 2 2 13022 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 2 2 12809
70 % 160 372 9
50 % 230 566 7
40 % 375 916 5
30 % 421 1042 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.