Sequence Similarity Clusters for the Entities in PDB 1FV1

Entity #1 | Chains: A,D
MAJOR HISTOCOMPATIBILITY COMPLEX ALPHA CHAIN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 74 227
95 % 12 81 288
90 % 14 97 232
70 % 14 97 264
50 % 18 149 176
40 % 18 149 189
30 % 35 310 94
Entity #2 | Chains: B,E
MAJOR HISTOCOMPATIBILITY COMPLEX BETA CHAIN protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 7175
95 % 1 4 7744
90 % 12 76 331
70 % 17 140 161
50 % 18 149 175
40 % 18 149 188
30 % 36 310 94
Entity #3 | Chains: C,F
MYELIN BASIC PROTEIN protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48960
95 % 1 1 36671
90 % 1 1 35037
70 % 1 1 31229
50 % 1 1 26773
40 % 1 1 23699
30 % 1 1 20195

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.