Sequence Similarity Clusters for the Entities in PDB 1FV1

Entity #1 | Chains: A,D
MAJOR HISTOCOMPATIBILITY COMPLEX ALPHA CHAIN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 69 236
95 % 10 76 310
90 % 12 92 238
70 % 12 92 273
50 % 16 144 180
40 % 16 144 195
30 % 31 300 91
Entity #2 | Chains: B,E
MAJOR HISTOCOMPATIBILITY COMPLEX BETA CHAIN protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 6860
95 % 1 4 7399
90 % 10 73 337
70 % 15 135 166
50 % 16 144 179
40 % 16 144 194
30 % 32 300 91
Entity #3 | Chains: C,F
MYELIN BASIC PROTEIN protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47180
95 % 1 1 35307
90 % 1 1 33785
70 % 1 1 30212
50 % 1 1 25966
40 % 1 1 22995
30 % 1 1 19597

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.