Sequence Similarity Clusters for the Entities in PDB 1FV1

Entity #1 | Chains: A,D
MAJOR HISTOCOMPATIBILITY COMPLEX ALPHA CHAIN protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 69 231
95 % 10 76 306
90 % 12 92 237
70 % 12 92 269
50 % 16 142 180
40 % 16 142 193
30 % 31 296 100
Entity #2 | Chains: B,E
MAJOR HISTOCOMPATIBILITY COMPLEX BETA CHAIN protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 6788
95 % 1 4 7318
90 % 10 73 333
70 % 15 133 166
50 % 16 142 179
40 % 16 142 192
30 % 32 296 100
Entity #3 | Chains: C,F
MYELIN BASIC PROTEIN protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46775
95 % 1 1 35011
90 % 1 1 33508
70 % 1 1 29981
50 % 1 1 25766
40 % 1 1 22816
30 % 1 1 19443

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.