Sequence Similarity Clusters for the Entities in PDB 1FTO

Entity #1 | Chains: A,B
GLUTAMATE RECEPTOR SUBUNIT 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 107 119 99
95 % 143 161 63 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 162 184 65
70 % 162 184 78
50 % 237 278 38
40 % 238 279 54
30 % 295 360 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures