Sequence Similarity Clusters for the Entities in PDB 1FTO

Entity #1 | Chains: A,B
GLUTAMATE RECEPTOR SUBUNIT 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 111 123 100
95 % 148 166 68 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 167 189 65
70 % 167 189 75
50 % 243 284 49
40 % 244 285 62
30 % 301 366 49

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures