Sequence Similarity Clusters for the Entities in PDB 1FTJ

Entity #1 | Chains: A,B,C
GLUTAMATE RECEPTOR SUBUNIT 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 66 74 113
95 % 144 161 61 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 163 184 59
70 % 163 184 70
50 % 238 276 37
40 % 239 277 48
30 % 253 293 56

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures