Sequence Similarity Clusters for the Entities in PDB 1FTJ

Entity #1 | Chains: A,B,C
GLUTAMATE RECEPTOR SUBUNIT 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 65 73 111
95 % 140 157 62 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 159 180 61
70 % 159 180 71
50 % 234 272 36
40 % 235 273 48
30 % 249 289 58

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures