Sequence Similarity Clusters for the Entities in PDB 1FT2

Entity #1 | Chains: A
PROTEIN FARNESYLTRANSFERASE protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25096
95 % 7 10 7301 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 7 10 6903
70 % 7 10 6696
50 % 7 10 6729
40 % 7 10 6243
30 % 22 25 2324
Entity #2 | Chains: B
PROTEIN FARNESYLTRANSFERASE protein, length: 401 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 38 41 1124
95 % 52 56 956 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 52 56 983
70 % 52 56 1018
50 % 52 56 1064
40 % 52 56 1074
30 % 52 56 1078

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures